- Aug 28, 2015
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Marcelo Vanzin authored
This change aims at speeding up the dev cycle a little bit, by making sure that all tests behave the same w.r.t. where the code to be tested is loaded from. Namely, that means that tests don't rely on the assembly anymore, rather loading all needed classes from the build directories. The main change is to make sure all build directories (classes and test-classes) are added to the classpath of child processes when running tests. YarnClusterSuite required some custom code since the executors are run differently (i.e. not through the launcher library, like standalone and Mesos do). I also found a couple of tests that could leak a SparkContext on failure, and added code to handle those. With this patch, it's possible to run the following command from a clean source directory and have all tests pass: mvn -Pyarn -Phadoop-2.4 -Phive-thriftserver install Author: Marcelo Vanzin <vanzin@cloudera.com> Closes #7629 from vanzin/SPARK-9284.
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Josh Rosen authored
This commit fixes an issue where the public SQL `Row` class did not override `hashCode`, causing it to violate the hashCode() + equals() contract. To fix this, I simply ported the `hashCode` implementation from the 1.4.x version of `Row`. Author: Josh Rosen <joshrosen@databricks.com> Closes #8500 from JoshRosen/SPARK-10325 and squashes the following commits: 51ffea1 [Josh Rosen] Override hashCode() for public Row.
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Luciano Resende authored
This is based on davies comment on SPARK-8952 which suggests to only call normalizePath() when path starts with '~' Author: Luciano Resende <lresende@apache.org> Closes #8343 from lresende/SPARK-8952.
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Yuhao Yang authored
jira: https://issues.apache.org/jira/browse/SPARK-9890 document with Scala and java examples Author: Yuhao Yang <hhbyyh@gmail.com> Closes #8487 from hhbyyh/cvDoc.
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jerryshao authored
Current port number is fixed as default (7337) in test, this will introduce port contention exception, better to change to a random number in unit test. squito , seems you're author of this unit test, mind taking a look at this fix? Thanks a lot. ``` [info] - executor state kept across NM restart *** FAILED *** (597 milliseconds) [info] org.apache.hadoop.service.ServiceStateException: java.net.BindException: Address already in use [info] at org.apache.hadoop.service.ServiceStateException.convert(ServiceStateException.java:59) [info] at org.apache.hadoop.service.AbstractService.init(AbstractService.java:172) [info] at org.apache.spark.network.yarn.YarnShuffleServiceSuite$$anonfun$1.apply$mcV$sp(YarnShuffleServiceSuite.scala:72) [info] at org.apache.spark.network.yarn.YarnShuffleServiceSuite$$anonfun$1.apply(YarnShuffleServiceSuite.scala:70) [info] at org.apache.spark.network.yarn.YarnShuffleServiceSuite$$anonfun$1.apply(YarnShuffleServiceSuite.scala:70) [info] at org.scalatest.Transformer$$anonfun$apply$1.apply$mcV$sp(Transformer.scala:22) [info] at org.scalatest.OutcomeOf$class.outcomeOf(OutcomeOf.scala:85) [info] at org.scalatest.OutcomeOf$.outcomeOf(OutcomeOf.scala:104) [info] at org.scalatest.Transformer.apply(Transformer.scala:22) [info] at org.scalatest.Transformer.apply(Transformer.scala:20) [info] at org.scalatest.FunSuiteLike$$anon$1.apply(FunSuiteLike.scala:166) [info] at org.apache.spark.SparkFunSuite.withFixture(SparkFunSuite.scala:42) ... ``` Author: jerryshao <sshao@hortonworks.com> Closes #8502 from jerryshao/avoid-hardcode-port.
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Dharmesh Kakadia authored
Author: Dharmesh Kakadia <dharmeshkakadia@users.noreply.github.com> Closes #8497 from dharmeshkakadia/patch-2.
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Keiji Yoshida authored
Fix DynamodDB/DynamoDB typo in Kinesis Integration doc Author: Keiji Yoshida <yoshida.keiji.84@gmail.com> Closes #8501 from yosssi/patch-1.
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Sean Owen authored
Remove obsolete warning about dynamic allocation not working with cached RDDs See discussion in https://issues.apache.org/jira/browse/SPARK-10295 Author: Sean Owen <sowen@cloudera.com> Closes #8489 from srowen/SPARK-10295.
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Yu ISHIKAWA authored
### JIRA [[SPARK-10260] Add Since annotation to ml.clustering - ASF JIRA](https://issues.apache.org/jira/browse/SPARK-10260) Author: Yu ISHIKAWA <yuu.ishikawa@gmail.com> Closes #8455 from yu-iskw/SPARK-10260.
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Shivaram Venkataraman authored
S3 function is at https://stat.ethz.ch/R-manual/R-patched/library/stats/html/na.fail.html Author: Shivaram Venkataraman <shivaram@cs.berkeley.edu> Author: Shivaram Venkataraman <shivaram.venkataraman@gmail.com> Author: Yu ISHIKAWA <yuu.ishikawa@gmail.com> Closes #8495 from shivaram/na-omit-fix.
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noelsmith authored
* Added isLargerBetter() method to Pyspark Evaluator to match the Scala version. * JavaEvaluator delegates isLargerBetter() to underlying Scala object. * Added check for isLargerBetter() in CrossValidator to determine whether to use argmin or argmax. * Added test cases for where smaller is better (RMSE) and larger is better (R-Squared). (This contribution is my original work and that I license the work to the project under Sparks' open source license) Author: noelsmith <mail@noelsmith.com> Closes #8399 from noel-smith/pyspark-rmse-xval-fix.
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Cheng Lian authored
Author: Cheng Lian <lian@databricks.com> Closes #8481 from liancheng/hive-context-typo.
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- Aug 27, 2015
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Feynman Liang authored
* Adds user guide for `LinearRegressionSummary` * Fixes unresolved issues in #8197 CC jkbradley mengxr Author: Feynman Liang <fliang@databricks.com> Closes #8491 from feynmanliang/SPARK-9905.
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MechCoder authored
I added a small note about the different types of evaluator and the metrics used. Author: MechCoder <manojkumarsivaraj334@gmail.com> Closes #8304 from MechCoder/multiclass_evaluator.
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Yu ISHIKAWA authored
JoshRosen we'd like to check the SparkR source code with the `dev/lint-r` script on the Jenkins. I tried to incorporate the script into `dev/run-test.py`. Could you review it when you have time? shivaram I modified `dev/lint-r` and `dev/lint-r.R` to install lintr package into a local directory(`R/lib/`) and to exit with a lint status. Could you review it? - [[SPARK-8505] Add settings to kick `lint-r` from `./dev/run-test.py` - ASF JIRA](https://issues.apache.org/jira/browse/SPARK-8505) Author: Yu ISHIKAWA <yuu.ishikawa@gmail.com> Closes #7883 from yu-iskw/SPARK-8505.
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Davies Liu authored
Having sizeInBytes in HadoopFsRelation to enable broadcast join. cc marmbrus Author: Davies Liu <davies@databricks.com> Closes #8490 from davies/sizeInByte.
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Yin Huai authored
https://issues.apache.org/jira/browse/SPARK-10287 After porting json to HadoopFsRelation, it seems hard to keep the behavior of picking up new files automatically for JSON. This PR removes this behavior, so JSON is consistent with others (ORC and Parquet). Author: Yin Huai <yhuai@databricks.com> Closes #8469 from yhuai/jsonRefresh.
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Feynman Liang authored
* Adds user guide for ml.feature.StopWordsRemovers, ran code examples on my machine * Cleans up scaladocs for public methods * Adds test for Java compatibility * Follow up Python user guide code example is tracked by SPARK-10249 Author: Feynman Liang <fliang@databricks.com> Closes #8436 from feynmanliang/SPARK-10230.
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MechCoder authored
User guide for LogisticRegression summaries Author: MechCoder <manojkumarsivaraj334@gmail.com> Author: Manoj Kumar <mks542@nyu.edu> Author: Feynman Liang <fliang@databricks.com> Closes #8197 from MechCoder/log_summary_user_guide.
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Yuhao Yang authored
jira: https://issues.apache.org/jira/browse/SPARK-9901 The jira covers only the document update. I can further provide example code for QR (like the ones for SVD and PCA) in a separate PR. Author: Yuhao Yang <hhbyyh@gmail.com> Closes #8462 from hhbyyh/qrDoc.
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CodingCat authored
https://issues.apache.org/jira/browse/SPARK-10315 this parameter is not used any longer and there is some mistake in the current document , should be 'akka.remote.watch-failure-detector.threshold' Author: CodingCat <zhunansjtu@gmail.com> Closes #8483 from CodingCat/SPARK_10315.
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Michael Armbrust authored
Author: Michael Armbrust <michael@databricks.com> Closes #8441 from marmbrus/documentation.
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Vyacheslav Baranov authored
`GeneralizedLinearModel` creates a cached RDD when building a model. It's inconvenient, since these RDDs flood the memory when building several models in a row, so useful data might get evicted from the cache. The proposed solution is to always cache the dataset & remove the warning. There's a caveat though: input dataset gets evaluated twice, in line 270 when fitting `StandardScaler` for the first time, and when running optimizer for the second time. So, it might worth to return removed warning. Another possible solution is to disable caching entirely & return removed warning. I don't really know what approach is better. Author: Vyacheslav Baranov <slavik.baranov@gmail.com> Closes #8395 from SlavikBaranov/SPARK-10182.
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Feynman Liang authored
* Replaces instances of `Lists.newArrayList` with `Arrays.asList` * Replaces `commons.lang.StringUtils` over `com.google.collections.Strings` * Replaces `List` interface over `ArrayList` implementations This PR along with #8445 #8446 #8447 completely removes all `com.google.collections.Lists` dependencies within mllib's Java tests. Author: Feynman Liang <fliang@databricks.com> Closes #8451 from feynmanliang/SPARK-10257.
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Jacek Laskowski authored
Fix for [JavaConverters.asJavaListConverter](http://www.scala-lang.org/api/2.10.5/index.html#scala.collection.JavaConverters$) being removed in 2.11.7 and hence the build fails with the 2.11 profile enabled. Tested with the default 2.10 and 2.11 profiles. BUILD SUCCESS in both cases. Build for 2.10: ./build/mvn -Pyarn -Phadoop-2.6 -Dhadoop.version=2.7.1 -DskipTests clean install and 2.11: ./dev/change-scala-version.sh 2.11 ./build/mvn -Pyarn -Phadoop-2.6 -Dhadoop.version=2.7.1 -Dscala-2.11 -DskipTests clean install Author: Jacek Laskowski <jacek@japila.pl> Closes #8479 from jaceklaskowski/SPARK-9613-hotfix.
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Feynman Liang authored
Author: Feynman Liang <fliang@databricks.com> Closes #8447 from feynmanliang/SPARK-10256.
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Feynman Liang authored
Author: Feynman Liang <fliang@databricks.com> Closes #8446 from feynmanliang/SPARK-10255.
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Feynman Liang authored
* Replaces `com.google.common` dependencies with `java.util.Arrays` * Small clean up in `JavaNormalizerSuite` Author: Feynman Liang <fliang@databricks.com> Closes #8445 from feynmanliang/SPARK-10254.
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Moussa Taifi authored
Fix Typo in exactly once semantics [Semantics of output operations] link Author: Moussa Taifi <moutai10@gmail.com> Closes #8468 from moutai/patch-3.
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Ram Sriharsha authored
…ion by default Author: Ram Sriharsha <rsriharsha@hw11853.local> Closes #8465 from harsha2010/SPARK-10251.
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Shivaram Venkataraman authored
cc sun-rui davies Author: Shivaram Venkataraman <shivaram@cs.berkeley.edu> Closes #8475 from shivaram/varargs-fix.
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Yanbo Liang authored
PySpark DataFrameReader should could accept an RDD of Strings (like the Scala version does) for JSON, rather than only taking a path. If this PR is merged, it should be duplicated to cover the other input types (not just JSON). Author: Yanbo Liang <ybliang8@gmail.com> Closes #8444 from yanboliang/spark-9964.
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- Aug 26, 2015
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Cheng Lian authored
Author: Cheng Lian <lian@databricks.com> Closes #8467 from liancheng/spark-9424/parquet-docs-for-1.5.
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Yu ISHIKAWA authored
Getting rid of some validation problems in SparkR https://github.com/apache/spark/pull/7883 cc shivaram ``` inst/tests/test_Serde.R:26:1: style: Trailing whitespace is superfluous. ^~ inst/tests/test_Serde.R:34:1: style: Trailing whitespace is superfluous. ^~ inst/tests/test_Serde.R:37:38: style: Trailing whitespace is superfluous. expect_equal(class(x), "character") ^~ inst/tests/test_Serde.R:50:1: style: Trailing whitespace is superfluous. ^~ inst/tests/test_Serde.R:55:1: style: Trailing whitespace is superfluous. ^~ inst/tests/test_Serde.R:60:1: style: Trailing whitespace is superfluous. ^~ inst/tests/test_sparkSQL.R:611:1: style: Trailing whitespace is superfluous. ^~ R/DataFrame.R:664:1: style: Trailing whitespace is superfluous. ^~~~~~~~~~~~~~ R/DataFrame.R:670:55: style: Trailing whitespace is superfluous. df <- data.frame(row.names = 1 : nrow) ^~~~~~~~~~~~~~~~ R/DataFrame.R:672:1: style: Trailing whitespace is superfluous. ^~~~~~~~~~~~~~ R/DataFrame.R:686:49: style: Trailing whitespace is superfluous. df[[names[colIndex]]] <- vec ^~~~~~~~~~~~~~~~~~ ``` Author: Yu ISHIKAWA <yuu.ishikawa@gmail.com> Closes #8474 from yu-iskw/minor-fix-sparkr.
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Shivaram Venkataraman authored
I also checked all the other functions defined in column.R, functions.R and DataFrame.R and everything else looked fine. cc yu-iskw Author: Shivaram Venkataraman <shivaram@cs.berkeley.edu> Closes #8473 from shivaram/in-namespace.
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Davies Liu authored
cc jkbradley Author: Davies Liu <davies@databricks.com> Closes #8470 from davies/fix_create_df.
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Xiangrui Meng authored
Same as #8421 but for `mllib.recommendation`. cc srowen coderxiang Author: Xiangrui Meng <meng@databricks.com> Closes #8432 from mengxr/SPARK-10241.
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Patrick Wendell authored
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Xiangrui Meng authored
I only found `ml.NaiveBayes` missing `Experimental` annotation. This PR doesn't cover Python APIs. cc jkbradley Author: Xiangrui Meng <meng@databricks.com> Closes #8452 from mengxr/SPARK-9665.
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Reynold Xin authored
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