69191c96 · Add per visit collate function for CodeEmbg

fe1d9382 · Added model evaluation and visualization

7c5f7173 · Add global dictionary of cond codes for CodeEmb

bc1be615 · Finish BERT emb.

72c899a8 · Fix CodeEmb collate order

6571fcd8 · Update heading

350567d7 · Split CodeEmb and DescEmb loaders

42468af2 · Update BERT xform to return a tensor (#cond+#proc+#drug, 768) i.e. seq

2a43602f · Add a per-patient i.e. all visits -> one list of conditions pred task

92f48d4a · Generate embeddings

2d2a37d3 · Add some additional text LUT code and DataLoader skeleton.

25d4d101 · Update MIMIC3DatasetWrapper to parse D_* tables

2a76a5e2 · Add DIAGNOSIS tables to input data

be496e89 · Notebook: add pyHealth dataset parsing (incomplete)

a4e89fe7 · Change MIMIC-III .csv headers to all caps. pyHealth Dataset require...

fe1bb1d7 · Add install script for Py deps. Add skeleton .ipynb that loads BERT.

0e7f1962 · added reference to original and separated unused csv files out

0459302a · Added MIMICIII database

b0060631 · Update README