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  1. Nov 03, 2014
    • Xiangrui Meng's avatar
      [SPARK-4148][PySpark] fix seed distribution and add some tests for rdd.sample · 3cca1962
      Xiangrui Meng authored
      The current way of seed distribution makes the random sequences from partition i and i+1 offset by 1.
      
      ~~~
      In [14]: import random
      
      In [15]: r1 = random.Random(10)
      
      In [16]: r1.randint(0, 1)
      Out[16]: 1
      
      In [17]: r1.random()
      Out[17]: 0.4288890546751146
      
      In [18]: r1.random()
      Out[18]: 0.5780913011344704
      
      In [19]: r2 = random.Random(10)
      
      In [20]: r2.randint(0, 1)
      Out[20]: 1
      
      In [21]: r2.randint(0, 1)
      Out[21]: 0
      
      In [22]: r2.random()
      Out[22]: 0.5780913011344704
      ~~~
      
      Note: The new tests are not for this bug fix.
      
      Author: Xiangrui Meng <meng@databricks.com>
      
      Closes #3010 from mengxr/SPARK-4148 and squashes the following commits:
      
      869ae4b [Xiangrui Meng] move tests tests.py
      c1bacd9 [Xiangrui Meng] fix seed distribution and add some tests for rdd.sample
      3cca1962
  2. Oct 22, 2014
    • freeman's avatar
      Fix for sampling error in NumPy v1.9 [SPARK-3995][PYSPARK] · 97cf19f6
      freeman authored
      Change maximum value for default seed during RDD sampling so that it is strictly less than 2 ** 32. This prevents a bug in the most recent version of NumPy, which cannot accept random seeds above this bound.
      
      Adds an extra test that uses the default seed (instead of setting it manually, as in the docstrings).
      
      mengxr
      
      Author: freeman <the.freeman.lab@gmail.com>
      
      Closes #2889 from freeman-lab/pyspark-sampling and squashes the following commits:
      
      dc385ef [freeman] Change maximum value for default seed
      97cf19f6
  3. Aug 06, 2014
    • Nicholas Chammas's avatar
      [SPARK-2627] [PySpark] have the build enforce PEP 8 automatically · d614967b
      Nicholas Chammas authored
      As described in [SPARK-2627](https://issues.apache.org/jira/browse/SPARK-2627), we'd like Python code to automatically be checked for PEP 8 compliance by Jenkins. This pull request aims to do that.
      
      Notes:
      * We may need to install [`pep8`](https://pypi.python.org/pypi/pep8) on the build server.
      * I'm expecting tests to fail now that PEP 8 compliance is being checked as part of the build. I'm fine with cleaning up any remaining PEP 8 violations as part of this pull request.
      * I did not understand why the RAT and scalastyle reports are saved to text files. I did the same for the PEP 8 check, but only so that the console output style can match those for the RAT and scalastyle checks. The PEP 8 report is removed right after the check is complete.
      * Updates to the ["Contributing to Spark"](https://cwiki.apache.org/confluence/display/SPARK/Contributing+to+Spark) guide will be submitted elsewhere, as I don't believe that text is part of the Spark repo.
      
      Author: Nicholas Chammas <nicholas.chammas@gmail.com>
      Author: nchammas <nicholas.chammas@gmail.com>
      
      Closes #1744 from nchammas/master and squashes the following commits:
      
      274b238 [Nicholas Chammas] [SPARK-2627] [PySpark] minor indentation changes
      983d963 [nchammas] Merge pull request #5 from apache/master
      1db5314 [nchammas] Merge pull request #4 from apache/master
      0e0245f [Nicholas Chammas] [SPARK-2627] undo erroneous whitespace fixes
      bf30942 [Nicholas Chammas] [SPARK-2627] PEP8: comment spacing
      6db9a44 [nchammas] Merge pull request #3 from apache/master
      7b4750e [Nicholas Chammas] merge upstream changes
      91b7584 [Nicholas Chammas] [SPARK-2627] undo unnecessary line breaks
      44e3e56 [Nicholas Chammas] [SPARK-2627] use tox.ini to exclude files
      b09fae2 [Nicholas Chammas] don't wrap comments unnecessarily
      bfb9f9f [Nicholas Chammas] [SPARK-2627] keep up with the PEP 8 fixes
      9da347f [nchammas] Merge pull request #2 from apache/master
      aa5b4b5 [Nicholas Chammas] [SPARK-2627] follow Spark bash style for if blocks
      d0a83b9 [Nicholas Chammas] [SPARK-2627] check that pep8 downloaded fine
      dffb5dd [Nicholas Chammas] [SPARK-2627] download pep8 at runtime
      a1ce7ae [Nicholas Chammas] [SPARK-2627] space out test report sections
      21da538 [Nicholas Chammas] [SPARK-2627] it's PEP 8, not PEP8
      6f4900b [Nicholas Chammas] [SPARK-2627] more misc PEP 8 fixes
      fe57ed0 [Nicholas Chammas] removing merge conflict backups
      9c01d4c [nchammas] Merge pull request #1 from apache/master
      9a66cb0 [Nicholas Chammas] resolving merge conflicts
      a31ccc4 [Nicholas Chammas] [SPARK-2627] miscellaneous PEP 8 fixes
      beaa9ac [Nicholas Chammas] [SPARK-2627] fail check on non-zero status
      723ed39 [Nicholas Chammas] always delete the report file
      0541ebb [Nicholas Chammas] [SPARK-2627] call Python linter from run-tests
      12440fa [Nicholas Chammas] [SPARK-2627] add Scala linter
      61c07b9 [Nicholas Chammas] [SPARK-2627] add Python linter
      75ad552 [Nicholas Chammas] make check output style consistent
      d614967b
  4. Jul 25, 2014
    • Doris Xin's avatar
      [SPARK-2656] Python version of stratified sampling · 2f75a4a3
      Doris Xin authored
      exact sample size not supported for now.
      
      Author: Doris Xin <doris.s.xin@gmail.com>
      
      Closes #1554 from dorx/pystratified and squashes the following commits:
      
      4ba927a [Doris Xin] use rel diff (+- 50%) instead of abs diff (+- 50)
      bdc3f8b [Doris Xin] updated unit to check sample holistically
      7713c7b [Doris Xin] Python version of stratified sampling
      2f75a4a3
  5. Jul 22, 2014
    • Nicholas Chammas's avatar
      [SPARK-2470] PEP8 fixes to PySpark · 5d16d5bb
      Nicholas Chammas authored
      This pull request aims to resolve all outstanding PEP8 violations in PySpark.
      
      Author: Nicholas Chammas <nicholas.chammas@gmail.com>
      Author: nchammas <nicholas.chammas@gmail.com>
      
      Closes #1505 from nchammas/master and squashes the following commits:
      
      98171af [Nicholas Chammas] [SPARK-2470] revert PEP 8 fixes to cloudpickle
      cba7768 [Nicholas Chammas] [SPARK-2470] wrap expression list in parentheses
      e178dbe [Nicholas Chammas] [SPARK-2470] style - change position of line break
      9127d2b [Nicholas Chammas] [SPARK-2470] wrap expression lists in parentheses
      22132a4 [Nicholas Chammas] [SPARK-2470] wrap conditionals in parentheses
      24639bc [Nicholas Chammas] [SPARK-2470] fix whitespace for doctest
      7d557b7 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to tests.py
      8f8e4c0 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to storagelevel.py
      b3b96cf [Nicholas Chammas] [SPARK-2470] PEP8 fixes to statcounter.py
      d644477 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to worker.py
      aa3a7b6 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to sql.py
      1916859 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to shell.py
      95d1d95 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to serializers.py
      a0fec2e [Nicholas Chammas] [SPARK-2470] PEP8 fixes to mllib
      c85e1e5 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to join.py
      d14f2f1 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to __init__.py
      81fcb20 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to resultiterable.py
      1bde265 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to java_gateway.py
      7fc849c [Nicholas Chammas] [SPARK-2470] PEP8 fixes to daemon.py
      ca2d28b [Nicholas Chammas] [SPARK-2470] PEP8 fixes to context.py
      f4e0039 [Nicholas Chammas] [SPARK-2470] PEP8 fixes to conf.py
      a6d5e4b [Nicholas Chammas] [SPARK-2470] PEP8 fixes to cloudpickle.py
      f0a7ebf [Nicholas Chammas] [SPARK-2470] PEP8 fixes to rddsampler.py
      4dd148f [nchammas] Merge pull request #5 from apache/master
      f7e4581 [Nicholas Chammas] unrelated pep8 fix
      a36eed0 [Nicholas Chammas] name ec2 instances and security groups consistently
      de7292a [nchammas] Merge pull request #4 from apache/master
      2e4fe00 [nchammas] Merge pull request #3 from apache/master
      89fde08 [nchammas] Merge pull request #2 from apache/master
      69f6e22 [Nicholas Chammas] PEP8 fixes
      2627247 [Nicholas Chammas] broke up lines before they hit 100 chars
      6544b7e [Nicholas Chammas] [SPARK-2065] give launched instances names
      69da6cf [nchammas] Merge pull request #1 from apache/master
      5d16d5bb
  6. Jul 15, 2014
  7. Apr 24, 2014
    • Arun Ramakrishnan's avatar
      SPARK-1438 RDD.sample() make seed param optional · 35e3d199
      Arun Ramakrishnan authored
      copying form previous pull request https://github.com/apache/spark/pull/462
      
      Its probably better to let the underlying language implementation take care of the default . This was easier to do with python as the default value for seed in random and numpy random is None.
      
      In Scala/Java side it might mean propagating an Option or null(oh no!) down the chain until where the Random is constructed. But, looks like the convention in some other methods was to use System.nanoTime. So, followed that convention.
      
      Conflict with overloaded method in sql.SchemaRDD.sample which also defines default params.
      sample(fraction, withReplacement=false, seed=math.random)
      Scala does not allow more than one overloaded to have default params. I believe the author intended to override the RDD.sample method and not overload it. So, changed it.
      
      If backward compatible is important, 3 new method can be introduced (without default params) like this
      sample(fraction)
      sample(fraction, withReplacement)
      sample(fraction, withReplacement, seed)
      
      Added some tests for the scala RDD takeSample method.
      
      Author: Arun Ramakrishnan <smartnut007@gmail.com>
      
      This patch had conflicts when merged, resolved by
      Committer: Matei Zaharia <matei@databricks.com>
      
      Closes #477 from smartnut007/master and squashes the following commits:
      
      07bb06e [Arun Ramakrishnan] SPARK-1438 fixing more space formatting issues
      b9ebfe2 [Arun Ramakrishnan] SPARK-1438 removing redundant import of random in python rddsampler
      8d05b1a [Arun Ramakrishnan] SPARK-1438 RDD . Replace System.nanoTime with a Random generated number. python: use a separate instance of Random instead of seeding language api global Random instance.
      69619c6 [Arun Ramakrishnan] SPARK-1438 fix spacing issue
      0c247db [Arun Ramakrishnan] SPARK-1438 RDD language apis to support optional seed in RDD methods sample/takeSample
      35e3d199
  8. Aug 28, 2013
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