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Commit b71b36d2 authored by hoaglan2's avatar hoaglan2
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Fixed encoding error for computer classification.

Removed words causing encoding errors.
parent cbad7835
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......@@ -41,8 +41,16 @@ def selectFeatures(train_set, train_text, k):
#words = [wnl.lemmatize(t, 'v') for t in words]
print str(len(words))+' words found.'
clean_words = []
for word in words:
try:
v = nltk.pos_tag(word)
clean_words.append(word)
except:
continue
# Tagging of the parts of speech
tagged_words = nltk.pos_tag(words)
tagged_words = nltk.pos_tag(clean_words)
words = [word for (word, tag) in tagged_words if tag in ['NN','JJ','NNS','RB','VB','VBD','VBG','VBN','VBP','VBZ']]
#words = set(words).intersection(set(unigrams+ bigrams+trigrams));
# Get the frequency of words
......
No preview for this file type
......@@ -10,7 +10,7 @@ import os
#markers for which sections to execute
pieces = {"Retrieve": False, "Unique": True, "ClassifyS1": True,
"ClassifyS2": False, "Procodes": True}
"ClassifyS2": True, "Procodes": True}
'''
SCRIPT 1 --> Retrieve the data
......@@ -23,7 +23,7 @@ if(pieces["Retrieve"]):
basepath = './../Original_Data';
os.chdir(basepath)
#get data from 2005-2012
#get data from 2006-2012
for Year in range(2007, 2008):
print 'Year '+str(Year);
startYear = Year;
......
limited,0.00436636013761
caused,0.0191131741793
lack,0.0144507671053
activated,0.0191131741793
results,0.00154029959698
alerting,0.0191131741793
seals,0.00355533068551
leads,0.00355533068551
surgical,0.00714835563023
sleep,0.0191131741793
hydraulic,0.00355533068551
skin,0.00355533068551
ventilator,0.00436636013761
enteric,0.00355533068551
integrity,0.00714835563023
assembled,0.00714835563023
webster,0.00355533068551
improperly,0.00355533068551
compact,0.00355533068551
larc,0.00355533068551
batches,0.00355533068551
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kwiktrak,0.00355533068551
send,0.0191131741793
subcomponents,0.00355533068551
environment,0.00355533068551
program,0.0386307781791
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assay,0.0107798878457
risk,0.0107798878457
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frequencies,0.0191131741793
compacts,0.00355533068551
probability,0.00355533068551
graphic,0.00355533068551
servicing,0.00355533068551
fall,0.0107798878457
affect,0.0144507671053
surgeon,0.00355533068551
securely,0.00355533068551
cool,0.00355533068551
switches,0.0191131741793
uni-clip,0.00355533068551
level,2.76963555943e-05
tear,0.0107798878457
issue,0.00436636013761
shock,0.00436636013761
list,0.00714835563023
applicable,0.0191131741793
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rate,0.0166978648319
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pass,0.00355533068551
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degree,0.0191131741793
exchange,0.00355533068551
component,0.0144507671053
indicator,0.00355533068551
ventilators,0.0191131741793
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pause,0.0191131741793
threads,0.00355533068551
latex-free,0.00355533068551
directions,2.76963555943e-05
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perforation,0.00355533068551
monitor-defibrillator,0.0191131741793
change,0.008929713772
extreme,0.00355533068551
engage,0.00355533068551
taper,0.00714835563023
technical,0.0191131741793
shift,0.00714835563023
terminals,0.00355533068551
reports,0.00714835563023
prior,0.00355533068551
resulting,2.76963555943e-05
smoke,0.00355533068551
inaccurage,0.00355533068551
anaerotest,0.00355533068551
changes,0.00355533068551
diameter,0.0107798878457
technique,0.00355533068551
regardless,0.0191131741793
valproic,0.00355533068551
extra,0.00355533068551
requiring,0.00355533068551
cylinder,0.00355533068551
nicoletone,0.0191131741793
anomalies,0.00355533068551
atrium,0.00355533068551
apply,0.00355533068551
counts,0.00355533068551
staple,0.00355533068551
unit,0.00714835563023
fracturing,0.00355533068551
overheat,0.00355533068551
variation,0.00355533068551
humidifier,0.00355533068551
contains,0.00355533068551
connector,0.00714835563023
process,0.0107798878457
sample,0.000975330714483
biliary,0.00355533068551
biosense,0.00355533068551
memory,0.0168999097695
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black,0.00355533068551
panel,0.00355533068551
minor,0.00355533068551
separated,0.00355533068551
plug,0.00714835563023
modification,0.00714835563023
initiated,0.00355533068551
nebulizers,0.00355533068551
visual,0.0191131741793
normalized,0.00355533068551
central,0.0191131741793
hole,2.76963555943e-05
pouch,0.00355533068551
clumps,0.00355533068551
customer,0.00714835563023
high,0.0144507671053
testying,0.00355533068551
anaerobic,0.00355533068551
recall,0.00355533068551
positives-the,0.00355533068551
modified,0.00355533068551
labeled,0.00263623971185
values,0.00355533068551
temperatures,0.00355533068551
drill,0.00355533068551
following,0.00436636013761
meet,0.0107798878457
male,0.00355533068551
control,0.0322635401109
bent,0.00355533068551
hemoglobin,0.00355533068551
lock,0.00714835563023
chip,0.00436636013761
bennett,0.00355533068551
catheters,0.0144507671053
states,0.00714835563023
indicates,0.00714835563023
detaching,0.00714835563023
defibrillation,0.00436636013761
numbers,0.00355533068551
serial,0.00355533068551
occur,0.0585735750948
counterfeit,0.0107798878457
information,0.00355533068551
triathlon,0.00355533068551
recovery,0.00436636013761
defective,0.00436636013761
provide,0.00714835563023
iggt,0.00355533068551
returning,0.0191131741793
feature,0.0386307781791
delay,0.0386307781791
gate,0.00355533068551
parameter,0.0386307781791
profile,0.00355533068551
product,0.0139063901664
specifications,0.0144507671053
stop,0.0208557213037
containing,0.00355533068551
produce,0.0191131741793
fatigue,0.00355533068551
designed,0.0386307781791
date,0.00714835563023
hemostatic,0.00355533068551
data,0.0191131741793
response,0.00436636013761
workstation,0.0191131741793
overspeed,0.0191131741793
laminate,0.00355533068551
microcoagulation,0.0191131741793
scenarios,0.0191131741793
switch,0.00436636013761
used,0.0137046985356
allow,2.76963555943e-05
correlation,0.00355533068551
infant,0.00355533068551
deform,0.00355533068551
burn,0.00355533068551
enter,0.00714835563023
wound,0.00355533068551
move,0.000975330714483
displayed,0.0386307781791
unacceptable,0.0191131741793
damage,0.000975330714483
stability,0.00355533068551
thermal,0.00355533068551
discrepancy,0.0386307781791
solder,0.00355533068551
contaminated,0.00355533068551
regions,0.0191131741793
outer,0.00714835563023
inlet,0.00714835563023
susceptible,0.00436636013761
lateral,0.00355533068551
actually,0.0181618611395
forms,0.00355533068551
detected,0.00355533068551
production,0.00355533068551
condition,0.0492165535006
communication,0.0191131741793
sterility,0.0181618611395
renaming,0.0191131741793
affected,0.00714835563023
sterilization,0.00355533068551
auto,0.0386307781791
handpiece,0.00355533068551
material,0.0181618611395
processes,0.00355533068551
break,0.0181618611395
reagent,0.00714835563023
cutting,0.00355533068551
therapy,0.0191131741793
undersized,0.00714835563023
foot,0.00355533068551
rotation,0.00436636013761
detach,0.0107798878457
silver,0.00355533068551
dielectric,0.00355533068551
instructions,0.00714835563023
stopper,0.00355533068551
chamfer,0.00355533068551
oxygen,0.00355533068551
chronic,0.00355533068551
edge,0.00355533068551
drop,0.00355533068551
identified,0.0168999097695
labeling,0.0107798878457
sufficiently,0.00355533068551
bolts,0.00355533068551
vibrations,0.00355533068551
found,0.0107798878457
tray,0.0107798878457
erratic,0.00355533068551
bone,0.00714835563023
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baxter,0.0191131741793
interruption,0.0191131741793
servo-i,0.00436636013761
activate,0.0191131741793
accelerator,0.0191131741793
fistula,0.00355533068551
energy,0.0386307781791
receipt,0.00355533068551
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wires,0.00355533068551
connect,0.00263623971185
calibrate,0.00355533068551
resuscitate,0.0191131741793
separating,0.00355533068551
laboratory,0.0191131741793
operation,0.0322635401109
event,0.0585735750948
standard,0.00436636013761
large,0.0191131741793
cubicin,0.00355533068551
display,0.143083675196
electronic,0.0191131741793
valve,0.00355533068551
interference,0.0191131741793
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contained,0.00355533068551
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safety,0.00714835563023
print,0.0191131741793
cause,0.0135509338379
occurs,0.0585735750948
assurance,0.0107798878457
shows,0.00355533068551
linear,0.000975330714483
barrier,0.00355533068551
workflow,0.0191131741793
centricity,0.0191131741793
possibility,0.00355533068551
promptly,0.00355533068551
difficulty,0.00355533068551
reason,0.0191131741793
base,0.00714835563023
bayer,0.00355533068551
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wall,0.00355533068551
care,0.00355533068551
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modules,0.0191131741793
filter,0.0107798878457
turn,0.0168999097695
length,0.00714835563023
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cleaning,0.00355533068551
carryover,0.00355533068551
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number,0.0181618611395
trocars,0.00355533068551
reacher,0.00355533068551
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needle,0.00355533068551
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i-stat,0.00355533068551
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v-lead,0.00355533068551
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false,0.0045444566034
de-lamination,0.00355533068551
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intraocular,0.00355533068551
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left-handed,0.00355533068551
medical,0.00355533068551
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concentration,0.00355533068551
neeg,0.0191131741793
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knee,0.00355533068551
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mach,0.00355533068551
latex,0.00355533068551
polyethylene,0.00355533068551
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elevate,0.000260952805506
microalbumin,0.00355533068551
staff,0.00355533068551
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ratio,0.0238963205875
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plate,0.0107798878457
tina-quant,0.00355533068551
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needs,0.0386307781791
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swan-ganz,0.00355533068551
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veeg,0.0191131741793
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tone,0.0386307781791
pose,0.0144507671053
battery,0.00436636013761
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height,0.00355533068551
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table,0.00201194745386
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reduction,0.00355533068551
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certain,0.000260952805506
expected,2.76963555943e-05
protrusions,0.00355533068551
utilizing,0.0191131741793
anomaly,0.0191131741793
board,0.0191131741793
firm,0.00201194745386
direction,0.0045444566034
versa,0.00355533068551
efficacy,0.00355533068551
packs,0.00436636013761
fire,0.00355533068551
concerning,0.00355533068551
precision,0.0107798878457
readings,0.00355533068551
controller,0.0191131741793
lift,0.0144507671053
external,0.00714835563023
protocols,0.0191131741793
sound,0.0191131741793
shaft,0.00355533068551
multi,0.00355533068551
disconnected,0.00355533068551
pacs,0.0191131741793
frozen,0.0191131741793
conformance,0.0191131741793
mount,0.00355533068551
resume,0.0191131741793
corrode,0.00355533068551
employ,0.00714835563023
abrupt,0.00355533068551
expiration,0.00355533068551
inaccurately,0.00355533068551
error,0.018707551114
stopping,0.0191131741793
situation,0.00436636013761
transfering,0.0191131741793
guide,0.00355533068551
procedure,0.00355533068551
welding,0.00355533068551
collimator,0.0191131741793
diaphragm,0.00355533068551
injury,0.00714835563023
coating,0.00355533068551
tests,0.0191131741793
surface,0.00355533068551
bias,0.00355533068551
turbidimetric,0.00355533068551
malformed,0.00355533068551
joints,0.00714835563023
confirmed,0.0386307781791
permeability,0.00355533068551
compromised,0.00355533068551
breakage-memory,0.00355533068551
radiation,0.0191131741793
material-,0.00355533068551
elevated,2.76963555943e-05
prothrombin,0.00355533068551
shorter,0.00714835563023
potentially,0.0144507671053
otto,0.00355533068551
incorrectly,0.000260952805506
units,0.00355533068551
calculation,0.0191131741793
strips,0.00714835563023
inadvertently,0.0386307781791
numerical,0.0191131741793
driver,0.00355533068551
effect,0.00714835563023
alert,0.0585735750948
action,0.00355533068551
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