diff --git a/README.md b/README.md index f59fc6a19bddd92224b24bb3dd94b9c264fe6cd0..66e9371df2588323064beeaef3e3bc7cae854e0f 100644 --- a/README.md +++ b/README.md @@ -1,2 +1,6 @@ This is my mini-arbd simulation package. The rigid-body is described as a collection of particles which do not have relative motion. -I also add a test directory containing an example of how to simulate a system with thousands of proteins in NPC-like system. \ No newline at end of file +I also add a test directory containing an example of how to simulate a system with thousands of proteins in NPC-like system. +cd test/npc_proteins/ +ln -s ../../mini_arbd +./mini_arbd min_arbd.bd output > log & +A trajectory named output.dcd will be generated with a log file named log. \ No newline at end of file